TPDB

3D PDB MODEL

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TPDB ID TPDB35579

Activity

Toxicity

Activity_category_statistics

Toxicity and safety peptides

Database_Source

Peptipedia

Sequence_Type

standard

Has_Modification No

Description A 110-aa standard natural toxicity peptide sequence curated from Peptipedia, with an available 3D structural model.

Sequence

MSTSELATSYAALILADDGVDITADKLQSLIKAAKIEEVEPIWTTLFAKALEGKDVKDLLLNVGSGGGAAPLPEALLLRWRAADAAPAAEEKKEEEKEESDEDMGFGLFD

FASTA

>TPDB35579|Toxicity|length=110
MSTSELATSYAALILADDGVDITADKLQSLIKAAKIEEVEPIWTTLFAKALEGKDVKDLLLNVGSGGGAAPLPEALLLRWRAADAAPAAEEKKEEEKEESDEDMGFGLFD

Formula C521H833N129O173S2

Absent Amino Acids CH

Common Amino Acids A

Mass 11736.23

PI 4.01

Basic Residues 11

Acidic Residues 24

Hydrophobic Residues 50

Net Charge -13

Boman Index 34.25

Hydrophobicity -0.138

Aliphatic Index 97.82

Half Life

Mammalian: 30 hour Yeast: >20 hour E.coli: >10 hour

Extinction Coefficient Cystines 12490

Absorbance 280nm 106.42

Polar Residues 14

number

18

A

2

R

1

N

10

D

0

C

14

E

1

Q

8

G

0

H

5

I

15

L

9

K

2

M

3

F

4

P

6

S

5

T

2

W

1

Y

4

V

Amino Acid Distribution

A: 18 R: 2 N: 1 D: 10 C: 0 E: 14 Q: 1 G: 8 H: 0 I: 5 L: 15 K: 9 M: 2 F: 3 P: 4 S: 6 T: 5 W: 2 Y: 1 V: 4

Length

110

Formula

C521H833N129O173S2

Mass

11736.23

PI

4.01

Net Charge

-13

Boman Index

34.25

Hydrophobicity

-0.138

Evidence 1 Activity

Source & Reference

Database Source NA