TPDB

3D PDB MODEL

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TPDB ID TPDB35514

Activity

Toxicity

Activity_category_statistics

Toxicity and safety peptides

Database_Source

Peptipedia

Sequence_Type

standard

Has_Modification No

Description A 99-aa standard natural toxicity peptide sequence curated from Peptipedia, with an available 3D structural model.

Sequence

MSTLGMVLLLLLLLLPLGNSDGDGDRQAMDRDRTAGEARSAPRLHLRRHMDHGRSAVKRCSTKWCGDDCCPSTACECEAHGGSGNEMGCSCPVVFLLAK

FASTA

>TPDB35514|Toxicity|length=99
MSTLGMVLLLLLLLLPLGNSDGDGDRQAMDRDRTAGEARSAPRLHLRRHMDHGRSAVKRCSTKWCGDDCCPSTACECEAHGGSGNEMGCSCPVVFLLAK

Formula C440H725N141O139S13

Absent Amino Acids IY

Common Amino Acids L

Mass 10631.24

PI 7.01

Basic Residues 16

Acidic Residues 12

Hydrophobic Residues 33

Net Charge +0

Boman Index 21.98

Hydrophobicity -0.219

Aliphatic Index 74.95

Half Life

Mammalian: 30 hour Yeast: >20 hour E.coli: >10 hour

Extinction Coefficient Cystines 6000

Absorbance 280nm 56.44

Polar Residues 23

number

8

A

9

R

2

N

8

D

8

C

4

E

1

Q

11

G

4

H

0

I

14

L

3

K

5

M

1

F

4

P

8

S

4

T

1

W

0

Y

4

V

Amino Acid Distribution

A: 8 R: 9 N: 2 D: 8 C: 8 E: 4 Q: 1 G: 11 H: 4 I: 0 L: 14 K: 3 M: 5 F: 1 P: 4 S: 8 T: 4 W: 1 Y: 0 V: 4

Length

99

Formula

C440H725N141O139S13

Mass

10631.24

PI

7.01

Net Charge

+0

Boman Index

21.98

Hydrophobicity

-0.219

Evidence 1 Activity

Source & Reference

Database Source NA