TPDB

3D PDB MODEL

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TPDB ID TPDB35503

Activity

Toxicity

Activity_category_statistics

Toxicity and safety peptides

Database_Source

Peptipedia

Sequence_Type

modified_plain

Has_Modification Yes

Description A 79-aa modified toxicity peptide sequence curated from Peptipedia, with an available 3D structural model.

Modification

Modified, details unspecified

Sequence

MSRLGIMVLTLLLLVYMATSHQDAGEKQATQRDAINFRWKRSLTRRTATEECEESCEEEEKTCCGEXDGEPVCARFCLG

FASTA

>TPDB35503|Toxicity|length=79
MSRLGIMVLTLLLLVYMATSHQDAGEKQATQRDAINFRWKRSLTRRTATEECEESCEEEEKTCCGEXDGEPVCARFCLG

Formula C371H603N109O123S9

Absent Amino Acids

Common Amino Acids E

Mass 8847.07

PI 4.74

Basic Residues 11

Acidic Residues 14

Hydrophobic Residues 26

Net Charge -4

Boman Index 26.58

Hydrophobicity -0.433

Aliphatic Index 67.97

Half Life

Mammalian: 30 hour Yeast: >20 hour E.coli: >10 hour

Extinction Coefficient Cystines 7365

Absorbance 280nm 83.25

Polar Residues 22

number

6

A

7

R

1

N

3

D

6

C

11

E

3

Q

5

G

1

H

2

I

8

L

3

K

3

M

2

F

1

P

4

S

7

T

1

W

1

Y

3

V

Amino Acid Distribution

A: 6 R: 7 N: 1 D: 3 C: 6 E: 11 Q: 3 G: 5 H: 1 I: 2 L: 8 K: 3 M: 3 F: 2 P: 1 S: 4 T: 7 W: 1 Y: 1 V: 3

Length

79

Formula

C371H603N109O123S9

Mass

8847.07

PI

4.74

Net Charge

-4

Boman Index

26.58

Hydrophobicity

-0.433

Evidence 1 Activity

Source & Reference

Database Source NA