TPDB

3D PDB MODEL

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TPDB ID TPDB35501

Activity

Toxicity

Activity_category_statistics

Toxicity and safety peptides

Database_Source

Peptipedia

Sequence_Type

standard

Has_Modification No

Description A 79-aa standard natural toxicity peptide sequence curated from Peptipedia, with an available 3D structural model.

Sequence

MSRLGIMVLTLLLLVFIVTSHQDAGEKQATQRDAINFRWRRSLIRRTATEECEEYCEDEEKTCCGLEDGEPVCATTCLG

FASTA

>TPDB35501|Toxicity|length=79
MSRLGIMVLTLLLLVFIVTSHQDAGEKQATQRDAINFRWRRSLIRRTATEECEEYCEDEEKTCCGLEDGEPVCATTCLG

Formula C380H619N109O124S8

Absent Amino Acids

Common Amino Acids E

Mass 8955.23

PI 4.55

Basic Residues 10

Acidic Residues 14

Hydrophobic Residues 28

Net Charge -5

Boman Index 24.10

Hydrophobicity -0.214

Aliphatic Index 85.19

Half Life

Mammalian: 30 hour Yeast: >20 hour E.coli: >10 hour

Extinction Coefficient Cystines 7365

Absorbance 280nm 82.24

Polar Residues 22

number

5

A

7

R

1

N

4

D

6

C

10

E

3

Q

5

G

1

H

4

I

9

L

2

K

2

M

2

F

1

P

3

S

8

T

1

W

1

Y

4

V

Amino Acid Distribution

A: 5 R: 7 N: 1 D: 4 C: 6 E: 10 Q: 3 G: 5 H: 1 I: 4 L: 9 K: 2 M: 2 F: 2 P: 1 S: 3 T: 8 W: 1 Y: 1 V: 4

Length

79

Formula

C380H619N109O124S8

Mass

8955.23

PI

4.55

Net Charge

-5

Boman Index

24.10

Hydrophobicity

-0.214

Evidence 1 Activity

Source & Reference

Database Source NA