TPDB

3D PDB MODEL

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TPDB ID TPDB35500

Activity

Toxicity

Activity_category_statistics

Toxicity and safety peptides

Database_Source

Peptipedia

Sequence_Type

standard

Has_Modification No

Description A 79-aa standard natural toxicity peptide sequence curated from Peptipedia, with an available 3D structural model.

Sequence

MSRLGIMVLTLLLLVFIVTSHQDAGEKQATQRAAINFRWKRSLTRRTATEECEEYCEDEEKTCCGEEDGEPVCARFCLG

FASTA

>TPDB35500|Toxicity|length=79
MSRLGIMVLTLLLLVFIVTSHQDAGEKQATQRAAINFRWKRSLTRRTATEECEEYCEDEEKTCCGEEDGEPVCARFCLG

Formula C383H618N110O123S8

Absent Amino Acids

Common Amino Acids E

Mass 8988.26

PI 4.74

Basic Residues 11

Acidic Residues 14

Hydrophobic Residues 28

Net Charge -4

Boman Index 25.31

Hydrophobicity -0.301

Aliphatic Index 76.58

Half Life

Mammalian: 30 hour Yeast: >20 hour E.coli: >10 hour

Extinction Coefficient Cystines 7365

Absorbance 280nm 81.94

Polar Residues 21

number

6

A

7

R

1

N

3

D

6

C

11

E

3

Q

5

G

1

H

3

I

8

L

3

K

2

M

3

F

1

P

3

S

7

T

1

W

1

Y

4

V

Amino Acid Distribution

A: 6 R: 7 N: 1 D: 3 C: 6 E: 11 Q: 3 G: 5 H: 1 I: 3 L: 8 K: 3 M: 2 F: 3 P: 1 S: 3 T: 7 W: 1 Y: 1 V: 4

Length

79

Formula

C383H618N110O123S8

Mass

8988.26

PI

4.74

Net Charge

-4

Boman Index

25.31

Hydrophobicity

-0.301

Evidence 1 Activity

Source & Reference

Database Source NA