TPDB

3D PDB MODEL

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TPDB ID TPDB35498

Activity

Toxicity

Activity_category_statistics

Toxicity and safety peptides

Database_Source

Peptipedia

Sequence_Type

standard

Has_Modification No

Description A 79-aa standard natural toxicity peptide sequence curated from Peptipedia, with an available 3D structural model.

Sequence

MSRLGIMVLTLLLLVFIVTSHQDAGEKQATHRGAINFRWRRSLIRRTATEECEEYCEDEEKTCCGLEDGEPVCATTCLG

FASTA

>TPDB35498|Toxicity|length=79
MSRLGIMVLTLLLLVFIVTSHQDAGEKQATHRGAINFRWRRSLIRRTATEECEEYCEDEEKTCCGLEDGEPVCATTCLG

Formula C379H616N110O121S8

Absent Amino Acids

Common Amino Acids E

Mass 8906.20

PI 4.88

Basic Residues 11

Acidic Residues 13

Hydrophobic Residues 28

Net Charge -4

Boman Index 23.26

Hydrophobicity -0.171

Aliphatic Index 85.19

Half Life

Mammalian: 30 hour Yeast: >20 hour E.coli: >10 hour

Extinction Coefficient Cystines 7365

Absorbance 280nm 82.70

Polar Residues 21

number

5

A

7

R

1

N

3

D

6

C

10

E

2

Q

6

G

2

H

4

I

9

L

2

K

2

M

2

F

1

P

3

S

8

T

1

W

1

Y

4

V

Amino Acid Distribution

A: 5 R: 7 N: 1 D: 3 C: 6 E: 10 Q: 2 G: 6 H: 2 I: 4 L: 9 K: 2 M: 2 F: 2 P: 1 S: 3 T: 8 W: 1 Y: 1 V: 4

Length

79

Formula

C379H616N110O121S8

Mass

8906.20

PI

4.88

Net Charge

-4

Boman Index

23.26

Hydrophobicity

-0.171

Evidence 1 Activity

Source & Reference

Database Source NA