TPDB

3D PDB MODEL

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TPDB ID TPDB35392

Activity

Toxicity

Activity_category_statistics

Toxicity and safety peptides

Database_Source

Peptipedia

Sequence_Type

standard

Has_Modification No

Description A 63-aa standard natural toxicity peptide sequence curated from Peptipedia, with an available 3D structural model.

Sequence

MRCLPVFVILLLLIASAPSVDAQPKTKDDIPQASFLDNAKRYLQVLESKRNCCRRQICCGRPS

FASTA

>TPDB35392|Toxicity|length=63
MRCLPVFVILLLLIASAPSVDAQPKTKDDIPQASFLDNAKRYLQVLESKRNCCRRQICCGRPS

Formula C309H517N91O87S6

Absent Amino Acids HW

Common Amino Acids L

Mass 7091.42

PI 9.22

Basic Residues 10

Acidic Residues 5

Hydrophobic Residues 25

Net Charge +5

Boman Index 11.05

Hydrophobicity -0.021

Aliphatic Index 100.63

Half Life

Mammalian: 30 hour Yeast: >20 hour E.coli: >10 hour

Extinction Coefficient Cystines 1740

Absorbance 280nm 24.54

Polar Residues 18

number

5

A

6

R

2

N

4

D

5

C

1

E

4

Q

1

G

0

H

4

I

8

L

4

K

1

M

2

F

5

P

5

S

1

T

0

W

1

Y

4

V

Amino Acid Distribution

A: 5 R: 6 N: 2 D: 4 C: 5 E: 1 Q: 4 G: 1 H: 0 I: 4 L: 8 K: 4 M: 1 F: 2 P: 5 S: 5 T: 1 W: 0 Y: 1 V: 4

Length

63

Formula

C309H517N91O87S6

Mass

7091.42

PI

9.22

Net Charge

+5

Boman Index

11.05

Hydrophobicity

-0.021

Evidence 1 Activity

Source & Reference

Database Source NA