TPDB

3D PDB MODEL

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TPDB ID TPDB35389

Activity

Toxicity

Activity_category_statistics

Toxicity and safety peptides

Database_Source

Peptipedia

Sequence_Type

standard

Has_Modification No

Description A 60-aa standard natural toxicity peptide sequence curated from Peptipedia, with an available 3D structural model.

Sequence

MRCLPVFVILLLLIASAPGVDAQPKTKYDVPLASRHDFAKKTPKRLSKPRDCCRRNFLCC

FASTA

>TPDB35389|Toxicity|length=60
MRCLPVFVILLLLIASAPGVDAQPKTKYDVPLASRHDFAKKTPKRLSKPRDCCRRNFLCC

Formula C303H502N88O77S6

Absent Amino Acids EW

Common Amino Acids L

Mass 6802.22

PI 10.13

Basic Residues 13

Acidic Residues 4

Hydrophobic Residues 24

Net Charge +8

Boman Index 9.63

Hydrophobicity -0.028

Aliphatic Index 92.67

Half Life

Mammalian: 30 hour Yeast: >20 hour E.coli: >10 hour

Extinction Coefficient Cystines 1740

Absorbance 280nm 25.58

Polar Residues 13

number

5

A

6

R

1

N

4

D

5

C

0

E

1

Q

1

G

1

H

2

I

8

L

6

K

1

M

3

F

6

P

3

S

2

T

0

W

1

Y

4

V

Amino Acid Distribution

A: 5 R: 6 N: 1 D: 4 C: 5 E: 0 Q: 1 G: 1 H: 1 I: 2 L: 8 K: 6 M: 1 F: 3 P: 6 S: 3 T: 2 W: 0 Y: 1 V: 4

Length

60

Formula

C303H502N88O77S6

Mass

6802.22

PI

10.13

Net Charge

+8

Boman Index

9.63

Hydrophobicity

-0.028

Evidence 1 Activity

Source & Reference

Database Source NA