TPDB

3D PDB MODEL

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TPDB ID TPDB35380

Activity

Toxicity

Activity_category_statistics

Toxicity and safety peptides

Database_Source

Peptipedia

Sequence_Type

standard

Has_Modification No

Description A 63-aa standard natural toxicity peptide sequence curated from Peptipedia, with an available 3D structural model.

Sequence

MRCLPVFIILLLLIPSAPCVDAQPKTKDDMLLASFHDNAKRTLQRFWKKRDCCPEKMWCCPLG

FASTA

>TPDB35380|Toxicity|length=63
MRCLPVFIILLLLIPSAPCVDAQPKTKDDMLLASFHDNAKRTLQRFWKKRDCCPEKMWCCPLG

Formula C327H526N88O83S9

Absent Amino Acids Y

Common Amino Acids L

Mass 7306.85

PI 8.59

Basic Residues 11

Acidic Residues 6

Hydrophobic Residues 26

Net Charge +4

Boman Index 7.41

Hydrophobicity 0.024

Aliphatic Index 89.84

Half Life

Mammalian: 30 hour Yeast: >20 hour E.coli: >10 hour

Extinction Coefficient Cystines 11375

Absorbance 280nm 155.68

Polar Residues 13

number

4

A

4

R

1

N

5

D

6

C

1

E

2

Q

1

G

1

H

3

I

9

L

6

K

3

M

3

F

6

P

2

S

2

T

2

W

0

Y

2

V

Amino Acid Distribution

A: 4 R: 4 N: 1 D: 5 C: 6 E: 1 Q: 2 G: 1 H: 1 I: 3 L: 9 K: 6 M: 3 F: 3 P: 6 S: 2 T: 2 W: 2 Y: 0 V: 2

Length

63

Formula

C327H526N88O83S9

Mass

7306.85

PI

8.59

Net Charge

+4

Boman Index

7.41

Hydrophobicity

0.024

Evidence 1 Activity

Source & Reference

Database Source NA