TPDB

3D PDB MODEL

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TPDB ID TPDB35376

Activity

Toxicity

Activity_category_statistics

Toxicity and safety peptides

Database_Source

Peptipedia

Sequence_Type

standard

Has_Modification No

Description A 64-aa standard natural toxicity peptide sequence curated from Peptipedia, with an available 3D structural model.

Sequence

MRCLPVFIILLLLIASAPGVDAQPKTKYNAPLTSLHDNAKGILQEHWNKRCCPRRLACCIIGRK

FASTA

>TPDB35376|Toxicity|length=64
MRCLPVFIILLLLIASAPGVDAQPKTKYNAPLTSLHDNAKGILQEHWNKRCCPRRLACCIIGRK

Formula C319H530N94O81S6

Absent Amino Acids

Common Amino Acids L

Mass 7170.66

PI 9.93

Basic Residues 12

Acidic Residues 3

Hydrophobic Residues 27

Net Charge +7

Boman Index 7.51

Hydrophobicity 0.106

Aliphatic Index 109.84

Half Life

Mammalian: 30 hour Yeast: >20 hour E.coli: >10 hour

Extinction Coefficient Cystines 7240

Absorbance 280nm 100.97

Polar Residues 15

number

6

A

5

R

3

N

2

D

5

C

1

E

2

Q

3

G

2

H

6

I

9

L

5

K

1

M

1

F

5

P

2

S

2

T

1

W

1

Y

2

V

Amino Acid Distribution

A: 6 R: 5 N: 3 D: 2 C: 5 E: 1 Q: 2 G: 3 H: 2 I: 6 L: 9 K: 5 M: 1 F: 1 P: 5 S: 2 T: 2 W: 1 Y: 1 V: 2

Length

64

Formula

C319H530N94O81S6

Mass

7170.66

PI

9.93

Net Charge

+7

Boman Index

7.51

Hydrophobicity

0.106

Evidence 1 Activity

Source & Reference

Database Source NA