TPDB

3D PDB MODEL

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TPDB ID TPDB35373

Activity

Toxicity

Activity_category_statistics

Toxicity and safety peptides

Database_Source

Peptipedia

Sequence_Type

standard

Has_Modification No

Description A 60-aa standard natural toxicity peptide sequence curated from Peptipedia, with an available 3D structural model.

Sequence

MRCLASLVVTLLLFTATATTGASNHVNAAASGKASDSISLAARDDCCPNPSCRQNHPERC

FASTA

>TPDB35373|Toxicity|length=60
MRCLASLVVTLLLFTATATTGASNHVNAAASGKASDSISLAARDDCCPNPSCRQNHPERC

Formula C256H424N82O86S6

Absent Amino Acids WY

Common Amino Acids A

Mass 6219.04

PI 7.74

Basic Residues 7

Acidic Residues 4

Hydrophobic Residues 22

Net Charge +1

Boman Index 9.38

Hydrophobicity 0.010

Aliphatic Index 76.67

Half Life

Mammalian: 30 hour Yeast: >20 hour E.coli: >10 hour

Extinction Coefficient Cystines 250

Absorbance 280nm 4.02

Polar Residues 22

number

10

A

4

R

4

N

3

D

5

C

1

E

1

Q

2

G

2

H

1

I

6

L

1

K

1

M

1

F

3

P

7

S

5

T

0

W

0

Y

3

V

Amino Acid Distribution

A: 10 R: 4 N: 4 D: 3 C: 5 E: 1 Q: 1 G: 2 H: 2 I: 1 L: 6 K: 1 M: 1 F: 1 P: 3 S: 7 T: 5 W: 0 Y: 0 V: 3

Length

60

Formula

C256H424N82O86S6

Mass

6219.04

PI

7.74

Net Charge

+1

Boman Index

9.38

Hydrophobicity

0.010

Evidence 1 Activity

Source & Reference

Database Source NA