TPDB

3D PDB MODEL

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TPDB ID TPDB35333

Activity

Toxicity

Activity_category_statistics

Toxicity and safety peptides

Database_Source

Peptipedia

Sequence_Type

standard

Has_Modification No

Description A 86-aa standard natural toxicity peptide sequence curated from Peptipedia, with an available 3D structural model.

Sequence

MRLPTMHSVILMLLLMFAFDNVDGDGQTARDVDNGKFMSSLQSEGMPARFFMLGEKRQLCESRSCPNDCGPDCRCDANNHCEDYWK

FASTA

>TPDB35333|Toxicity|length=86
MRLPTMHSVILMLLLMFAFDNVDGDGQTARDVDNGKFMSSLQSEGMPARFFMLGEKRQLCESRSCPNDCGPDCRCDANNHCEDYWK

Formula C414H644N120O130S13

Absent Amino Acids

Common Amino Acids D

Mass 9799.17

PI 4.72

Basic Residues 11

Acidic Residues 13

Hydrophobic Residues 30

Net Charge -4

Boman Index 18.91

Hydrophobicity -0.451

Aliphatic Index 55.58

Half Life

Mammalian: 30 hour Yeast: >20 hour E.coli: >10 hour

Extinction Coefficient Cystines 7365

Absorbance 280nm 75.16

Polar Residues 23

number

4

A

6

R

5

N

9

D

6

C

4

E

3

Q

6

G

2

H

1

I

8

L

3

K

7

M

5

F

4

P

6

S

2

T

1

W

1

Y

3

V

Amino Acid Distribution

A: 4 R: 6 N: 5 D: 9 C: 6 E: 4 Q: 3 G: 6 H: 2 I: 1 L: 8 K: 3 M: 7 F: 5 P: 4 S: 6 T: 2 W: 1 Y: 1 V: 3

Length

86

Formula

C414H644N120O130S13

Mass

9799.17

PI

4.72

Net Charge

-4

Boman Index

18.91

Hydrophobicity

-0.451

Evidence 1 Activity

Source & Reference

Database Source NA