TPDB

3D PDB MODEL

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TPDB ID TPDB35293

Activity

Toxicity

Activity_category_statistics

Toxicity and safety peptides

Database_Source

Peptipedia

Sequence_Type

standard

Has_Modification No

Description A 68-aa standard natural toxicity peptide sequence curated from Peptipedia, with an available 3D structural model.

Sequence

MQCKTCSFYTCPNSETCPDGKNICVKRSWTAVAGDGLKREIRRECAATCPPSKLGLTVFCCTTDNCNH

FASTA

>TPDB35293|Toxicity|length=68
MQCKTCSFYTCPNSETCPDGKNICVKRSWTAVAGDGLKREIRRECAATCPPSKLGLTVFCCTTDNCNH

Formula C310H499N93O99S11

Absent Amino Acids

Common Amino Acids C

Mass 7465.60

PI 7.96

Basic Residues 10

Acidic Residues 6

Hydrophobic Residues 17

Net Charge +3

Boman Index 14.19

Hydrophobicity -0.375

Aliphatic Index 47.35

Half Life

Mammalian: 30 hour Yeast: >20 hour E.coli: >10 hour

Extinction Coefficient Cystines 7615

Absorbance 280nm 102.00

Polar Residues 28

number

4

A

4

R

4

N

3

D

10

C

3

E

1

Q

4

G

1

H

2

I

3

L

5

K

1

M

2

F

4

P

4

S

8

T

1

W

1

Y

3

V

Amino Acid Distribution

A: 4 R: 4 N: 4 D: 3 C: 10 E: 3 Q: 1 G: 4 H: 1 I: 2 L: 3 K: 5 M: 1 F: 2 P: 4 S: 4 T: 8 W: 1 Y: 1 V: 3

Length

68

Formula

C310H499N93O99S11

Mass

7465.60

PI

7.96

Net Charge

+3

Boman Index

14.19

Hydrophobicity

-0.375

Evidence 1 Activity

Source & Reference

Database Source NA