TPDB

3D PDB MODEL

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TPDB ID TPDB35261

Activity

Toxicity

Activity_category_statistics

Toxicity and safety peptides

Database_Source

Peptipedia

Sequence_Type

standard

Has_Modification No

Description A 92-aa standard natural toxicity peptide sequence curated from Peptipedia, with an available 3D structural model.

Sequence

MPKLEMMLLVLLILPLSYFSAAGGQVVQGDWRGDGLARYLQRGDRDAQGCQVVTPGSKWGRCCLNRVCGPMCCPASHCYCIYHRGRGHGCSC

FASTA

>TPDB35261|Toxicity|length=92
MPKLEMMLLVLLILPLSYFSAAGGQVVQGDWRGDGLARYLQRGDRDAQGCQVVTPGSKWGRCCLNRVCGPMCCPASHCYCIYHRGRGHGCSC

Formula C432H684N132O119S14

Absent Amino Acids

Common Amino Acids G

Mass 10079.84

PI 8.31

Basic Residues 13

Acidic Residues 5

Hydrophobic Residues 34

Net Charge +5

Boman Index 6.21

Hydrophobicity -0.002

Aliphatic Index 75.22

Half Life

Mammalian: 30 hour Yeast: >20 hour E.coli: >10 hour

Extinction Coefficient Cystines 17585

Absorbance 280nm 174.46

Polar Residues 26

number

5

A

8

R

1

N

4

D

10

C

1

E

5

Q

13

G

3

H

2

I

10

L

2

K

4

M

1

F

5

P

5

S

1

T

2

W

4

Y

6

V

Amino Acid Distribution

A: 5 R: 8 N: 1 D: 4 C: 10 E: 1 Q: 5 G: 13 H: 3 I: 2 L: 10 K: 2 M: 4 F: 1 P: 5 S: 5 T: 1 W: 2 Y: 4 V: 6

Length

92

Formula

C432H684N132O119S14

Mass

10079.84

PI

8.31

Net Charge

+5

Boman Index

6.21

Hydrophobicity

-0.002

Evidence 1 Activity

Source & Reference

Database Source NA