TPDB

3D PDB MODEL

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TPDB ID TPDB35217

Activity

Toxicity

Activity_category_statistics

Toxicity and safety peptides

Database_Source

Peptipedia

Sequence_Type

standard

Has_Modification No

Description A 96-aa standard natural toxicity peptide sequence curated from Peptipedia, with an available 3D structural model.

Sequence

MPKLAVVLLVLLILPLSYFVCGRWDKRYKGTWRGNRLARDLQRGGRDDESECIINTRDSPWGRCCRTRMCGSMCCPRNGCTCVYHWRRGHGCSCPG

FASTA

>TPDB35217|Toxicity|length=96
MPKLAVVLLVLLILPLSYFVCGRWDKRYKGTWRGNRLARDLQRGGRDDESECIINTRDSPWGRCCRTRMCGSMCCPRNGCTCVYHWRRGHGCSCPG

Formula C470H751N153O127S14

Absent Amino Acids

Common Amino Acids R

Mass 11025.92

PI 9.10

Basic Residues 19

Acidic Residues 7

Hydrophobic Residues 30

Net Charge +10

Boman Index 11.19

Hydrophobicity -0.396

Aliphatic Index 65.94

Half Life

Mammalian: 30 hour Yeast: >20 hour E.coli: >10 hour

Extinction Coefficient Cystines 27095

Absorbance 280nm 245.74

Polar Residues 27

number

2

A

14

R

3

N

5

D

11

C

2

E

1

Q

11

G

2

H

3

I

9

L

3

K

3

M

1

F

5

P

5

S

4

T

4

W

3

Y

5

V

Amino Acid Distribution

A: 2 R: 14 N: 3 D: 5 C: 11 E: 2 Q: 1 G: 11 H: 2 I: 3 L: 9 K: 3 M: 3 F: 1 P: 5 S: 5 T: 4 W: 4 Y: 3 V: 5

Length

96

Formula

C470H751N153O127S14

Mass

11025.92

PI

9.10

Net Charge

+10

Boman Index

11.19

Hydrophobicity

-0.396

Evidence 1 Activity

Source & Reference

Database Source NA