TPDB

3D PDB MODEL

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TPDB ID TPDB35208

Activity

Toxicity

Activity_category_statistics

Toxicity and safety peptides

Database_Source

Peptipedia

Sequence_Type

standard

Has_Modification No

Description A 95-aa standard natural toxicity peptide sequence curated from Peptipedia, with an available 3D structural model.

Sequence

MPKLAVVLLVLLILPLSYFDVAGGQAEQGDWRGNRLARDLQRGGRDDESECIINTRDSPWGRCCRTRMCGSMCCPRNGRTCVYHWRRGHGCSCPG

FASTA

>TPDB35208|Toxicity|length=95
MPKLAVVLLVLLILPLSYFDVAGGQAEQGDWRGNRLARDLQRGGRDDESECIINTRDSPWGRCCRTRMCGSMCCPRNGRTCVYHWRRGHGCSCPG

Formula C449H720N148O130S12

Absent Amino Acids

Common Amino Acids R

Mass 10656.29

PI 8.41

Basic Residues 16

Acidic Residues 9

Hydrophobic Residues 30

Net Charge +5

Boman Index 15.61

Hydrophobicity -0.406

Aliphatic Index 68.74

Half Life

Mammalian: 30 hour Yeast: >20 hour E.coli: >10 hour

Extinction Coefficient Cystines 19980

Absorbance 280nm 187.49

Polar Residues 25

number

4

A

13

R

3

N

6

D

9

C

3

E

3

Q

12

G

2

H

3

I

9

L

1

K

3

M

1

F

5

P

5

S

3

T

3

W

2

Y

5

V

Amino Acid Distribution

A: 4 R: 13 N: 3 D: 6 C: 9 E: 3 Q: 3 G: 12 H: 2 I: 3 L: 9 K: 1 M: 3 F: 1 P: 5 S: 5 T: 3 W: 3 Y: 2 V: 5

Length

95

Formula

C449H720N148O130S12

Mass

10656.29

PI

8.41

Net Charge

+5

Boman Index

15.61

Hydrophobicity

-0.406

Evidence 1 Activity

Source & Reference

Database Source NA