TPDB

3D PDB MODEL

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TPDB ID TPDB35101

Activity

Toxicity

Activity_category_statistics

Toxicity and safety peptides

Database_Source

Peptipedia

Sequence_Type

standard

Has_Modification No

Description A 80-aa standard natural toxicity peptide sequence curated from Peptipedia, with an available 3D structural model.

Sequence

MNTAGRLLLLCLALGLVFESLGKPVADDVEADRDTDPDDEDQGNLNPWFVHEEKCGSGTCTFGCCETINREPKCREFNCE

FASTA

>TPDB35101|Toxicity|length=80
MNTAGRLLLLCLALGLVFESLGKPVADDVEADRDTDPDDEDQGNLNPWFVHEEKCGSGTCTFGCCETINREPKCREFNCE

Formula C375H584N104O128S8

Absent Amino Acids Y

Common Amino Acids EL

Mass 8853.86

PI 4.01

Basic Residues 8

Acidic Residues 17

Hydrophobic Residues 24

Net Charge -10

Boman Index 26.67

Hydrophobicity -0.441

Aliphatic Index 68.25

Half Life

Mammalian: 30 hour Yeast: >20 hour E.coli: >10 hour

Extinction Coefficient Cystines 5875

Absorbance 280nm 66.36

Polar Residues 20

number

4

A

4

R

5

N

8

D

7

C

9

E

1

Q

7

G

1

H

1

I

9

L

3

K

1

M

4

F

4

P

2

S

5

T

1

W

0

Y

4

V

Amino Acid Distribution

A: 4 R: 4 N: 5 D: 8 C: 7 E: 9 Q: 1 G: 7 H: 1 I: 1 L: 9 K: 3 M: 1 F: 4 P: 4 S: 2 T: 5 W: 1 Y: 0 V: 4

Length

80

Formula

C375H584N104O128S8

Mass

8853.86

PI

4.01

Net Charge

-10

Boman Index

26.67

Hydrophobicity

-0.441

Evidence 1 Activity

Source & Reference

Database Source NA