TPDB

3D PDB MODEL

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TPDB ID TPDB35078

Activity

Toxicity

Activity_category_statistics

Toxicity and safety peptides

Database_Source

Peptipedia

Sequence_Type

standard

Has_Modification No

Description A 65-aa standard natural toxicity peptide sequence curated from Peptipedia, with an available 3D structural model.

Sequence

MNFYLLLTVTLLLASFTGGDARRIQGMDIYRHFVRRDCGRDCVGCDNPANCCCGGQTCVNGNKCE

FASTA

>TPDB35078|Toxicity|length=65
MNFYLLLTVTLLLASFTGGDARRIQGMDIYRHFVRRDCGRDCVGCDNPANCCCGGQTCVNGNKCE

Formula C299H477N93O92S10

Absent Amino Acids W

Common Amino Acids CG

Mass 7167.24

PI 7.49

Basic Residues 8

Acidic Residues 6

Hydrophobic Residues 22

Net Charge +1

Boman Index 7.60

Hydrophobicity -0.068

Aliphatic Index 70.46

Half Life

Mammalian: 30 hour Yeast: >20 hour E.coli: >10 hour

Extinction Coefficient Cystines 3480

Absorbance 280nm 48.55

Polar Residues 22

number

3

A

6

R

5

N

5

D

8

C

1

E

2

Q

8

G

1

H

2

I

6

L

1

K

2

M

3

F

1

P

1

S

4

T

0

W

2

Y

4

V

Amino Acid Distribution

A: 3 R: 6 N: 5 D: 5 C: 8 E: 1 Q: 2 G: 8 H: 1 I: 2 L: 6 K: 1 M: 2 F: 3 P: 1 S: 1 T: 4 W: 0 Y: 2 V: 4

Length

65

Formula

C299H477N93O92S10

Mass

7167.24

PI

7.49

Net Charge

+1

Boman Index

7.60

Hydrophobicity

-0.068

Evidence 1 Activity

Source & Reference

Database Source NA