TPDB

3D PDB MODEL

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TPDB ID TPDB35040

Activity

Toxicity

Activity_category_statistics

Toxicity and safety peptides

Database_Source

Peptipedia

Sequence_Type

standard

Has_Modification No

Description A 86-aa standard natural toxicity peptide sequence curated from Peptipedia, with an available 3D structural model.

Sequence

MMWKMRVMLFVVFLLFPLASLQQEGDIQAKKKDLKSNFYGALKRPARDCRGTCGHTDQCTGTCECEGHDSCSCSREGHYPGCTCSC

FASTA

>TPDB35040|Toxicity|length=86
MMWKMRVMLFVVFLLFPLASLQQEGDIQAKKKDLKSNFYGALKRPARDCRGTCGHTDQCTGTCECEGHDSCSCSREGHYPGCTCSC

Formula C407H641N119O123S14

Absent Amino Acids

Common Amino Acids C

Mass 9618.13

PI 7.73

Basic Residues 14

Acidic Residues 9

Hydrophobic Residues 26

Net Charge +2

Boman Index 16.48

Hydrophobicity -0.344

Aliphatic Index 51.05

Half Life

Mammalian: 30 hour Yeast: >20 hour E.coli: >10 hour

Extinction Coefficient Cystines 9105

Absorbance 280nm 94.66

Polar Residues 28

number

4

A

5

R

1

N

5

D

10

C

4

E

4

Q

8

G

3

H

1

I

7

L

6

K

4

M

4

F

3

P

6

S

5

T

1

W

2

Y

3

V

Amino Acid Distribution

A: 4 R: 5 N: 1 D: 5 C: 10 E: 4 Q: 4 G: 8 H: 3 I: 1 L: 7 K: 6 M: 4 F: 4 P: 3 S: 6 T: 5 W: 1 Y: 2 V: 3

Length

86

Formula

C407H641N119O123S14

Mass

9618.13

PI

7.73

Net Charge

+2

Boman Index

16.48

Hydrophobicity

-0.344

Evidence 1 Activity

Source & Reference

Database Source NA