TPDB

3D PDB MODEL

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TPDB ID TPDB35037

Activity

Toxicity

Activity_category_statistics

Toxicity and safety peptides

Database_Source

Peptipedia

Sequence_Type

standard

Has_Modification No

Description A 84-aa standard natural toxicity peptide sequence curated from Peptipedia, with an available 3D structural model.

Sequence

MMWKAGAVLFALLLVFSLAAVQPDLDERTFGRMKRDMFVRALKSKRDGQSCTTYCPGPGQQMTCGCAHLNEINSAFCFCLTRHR

FASTA

>TPDB35037|Toxicity|length=84
MMWKAGAVLFALLLVFSLAAVQPDLDERTFGRMKRDMFVRALKSKRDGQSCTTYCPGPGQQMTCGCAHLNEINSAFCFCLTRHR

Formula C412H654N120O113S11

Absent Amino Acids

Common Amino Acids L

Mass 9449.12

PI 8.89

Basic Residues 13

Acidic Residues 6

Hydrophobic Residues 35

Net Charge +5

Boman Index 7.71

Hydrophobicity -0.005

Aliphatic Index 69.76

Half Life

Mammalian: 30 hour Yeast: >20 hour E.coli: >10 hour

Extinction Coefficient Cystines 7365

Absorbance 280nm 77.94

Polar Residues 22

number

8

A

7

R

2

N

4

D

6

C

2

E

4

Q

6

G

2

H

1

I

9

L

4

K

5

M

6

F

3

P

4

S

5

T

1

W

1

Y

4

V

Amino Acid Distribution

A: 8 R: 7 N: 2 D: 4 C: 6 E: 2 Q: 4 G: 6 H: 2 I: 1 L: 9 K: 4 M: 5 F: 6 P: 3 S: 4 T: 5 W: 1 Y: 1 V: 4

Length

84

Formula

C412H654N120O113S11

Mass

9449.12

PI

8.89

Net Charge

+5

Boman Index

7.71

Hydrophobicity

-0.005

Evidence 1 Activity

Source & Reference

Database Source NA