TPDB

3D PDB MODEL

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TPDB ID TPDB34973

Activity

Toxicity

Activity_category_statistics

Toxicity and safety peptides

Database_Source

Peptipedia

Sequence_Type

standard

Has_Modification No

Description A 67-aa standard natural toxicity peptide sequence curated from Peptipedia, with an available 3D structural model.

Sequence

MMSKLGVLLTICLLLFPLTAVPLDGDQPADQPAERKQNEQHPLFDQKRGCCRWPCPSKCGMARCCSS

FASTA

>TPDB34973|Toxicity|length=67
MMSKLGVLLTICLLLFPLTAVPLDGDQPADQPAERKQNEQHPLFDQKRGCCRWPCPSKCGMARCCSS

Formula C319H518N92O92S10

Absent Amino Acids Y

Common Amino Acids L

Mass 7434.78

PI 7.93

Basic Residues 9

Acidic Residues 6

Hydrophobic Residues 22

Net Charge +2

Boman Index 12.06

Hydrophobicity -0.209

Aliphatic Index 72.84

Half Life

Mammalian: 30 hour Yeast: >20 hour E.coli: >10 hour

Extinction Coefficient Cystines 5875

Absorbance 280nm 79.02

Polar Residues 19

number

4

A

4

R

1

N

4

D

7

C

2

E

5

Q

4

G

1

H

1

I

9

L

4

K

3

M

2

F

7

P

4

S

2

T

1

W

0

Y

2

V

Amino Acid Distribution

A: 4 R: 4 N: 1 D: 4 C: 7 E: 2 Q: 5 G: 4 H: 1 I: 1 L: 9 K: 4 M: 3 F: 2 P: 7 S: 4 T: 2 W: 1 Y: 0 V: 2

Length

67

Formula

C319H518N92O92S10

Mass

7434.78

PI

7.93

Net Charge

+2

Boman Index

12.06

Hydrophobicity

-0.209

Evidence 1 Activity

Source & Reference

Database Source NA