TPDB

3D PDB MODEL

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TPDB ID TPDB34887

Activity

Toxicity

Activity_category_statistics

Toxicity and safety peptides

Database_Source

Peptipedia

Sequence_Type

standard

Has_Modification No

Description A 69-aa standard natural toxicity peptide sequence curated from Peptipedia, with an available 3D structural model.

Sequence

MLKTGVLLFTFLVLFPLATLQDADQPVERSVENKQDRNLEKRWGMKLLAQRQQECCEPAWCDGGCYHCC

FASTA

>TPDB34887|Toxicity|length=69
MLKTGVLLFTFLVLFPLATLQDADQPVERSVENKQDRNLEKRWGMKLLAQRQQECCEPAWCDGGCYHCC

Formula C349H549N97O101S8

Absent Amino Acids I

Common Amino Acids L

Mass 7976.27

PI 5.59

Basic Residues 9

Acidic Residues 9

Hydrophobic Residues 26

Net Charge -1

Boman Index 13.51

Hydrophobicity -0.283

Aliphatic Index 79.13

Half Life

Mammalian: 30 hour Yeast: >20 hour E.coli: >10 hour

Extinction Coefficient Cystines 12865

Absorbance 280nm 161.29

Polar Residues 19

number

4

A

4

R

2

N

4

D

6

C

5

E

6

Q

4

G

1

H

0

I

10

L

4

K

2

M

3

F

3

P

1

S

3

T

2

W

1

Y

4

V

Amino Acid Distribution

A: 4 R: 4 N: 2 D: 4 C: 6 E: 5 Q: 6 G: 4 H: 1 I: 0 L: 10 K: 4 M: 2 F: 3 P: 3 S: 1 T: 3 W: 2 Y: 1 V: 4

Length

69

Formula

C349H549N97O101S8

Mass

7976.27

PI

5.59

Net Charge

-1

Boman Index

13.51

Hydrophobicity

-0.283

Evidence 1 Activity

Source & Reference

Database Source NA