TPDB

3D PDB MODEL

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TPDB ID TPDB34857

Activity

Toxicity

Activity_category_statistics

Toxicity and safety peptides

Database_Source

Peptipedia

Sequence_Type

standard

Has_Modification No

Description A 71-aa standard natural toxicity peptide sequence curated from Peptipedia, with an available 3D structural model.

Sequence

MLKMGVVLFILLVLFPLATLQLDADQPVERYAENKQLLSPDERREIILSALRRQCCDSNSCEYPKCLCCNG

FASTA

>TPDB34857|Toxicity|length=71
MLKMGVVLFILLVLFPLATLQLDADQPVERYAENKQLLSPDERREIILSALRRQCCDSNSCEYPKCLCCNG

Formula C353H580N96O104S8

Absent Amino Acids HW

Common Amino Acids L

Mass 8089.55

PI 5.01

Basic Residues 8

Acidic Residues 9

Hydrophobic Residues 30

Net Charge -1

Boman Index 13.45

Hydrophobicity 0.104

Aliphatic Index 109.86

Half Life

Mammalian: 30 hour Yeast: >20 hour E.coli: >10 hour

Extinction Coefficient Cystines 3355

Absorbance 280nm 41.47

Polar Residues 20

number

4

A

5

R

3

N

4

D

6

C

5

E

4

Q

2

G

0

H

3

I

13

L

3

K

2

M

2

F

4

P

4

S

1

T

0

W

2

Y

4

V

Amino Acid Distribution

A: 4 R: 5 N: 3 D: 4 C: 6 E: 5 Q: 4 G: 2 H: 0 I: 3 L: 13 K: 3 M: 2 F: 2 P: 4 S: 4 T: 1 W: 0 Y: 2 V: 4

Length

71

Formula

C353H580N96O104S8

Mass

8089.55

PI

5.01

Net Charge

-1

Boman Index

13.45

Hydrophobicity

0.104

Evidence 1 Activity

Source & Reference

Database Source NA