TPDB

3D PDB MODEL

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TPDB ID TPDB34810

Activity

Toxicity

Activity_category_statistics

Toxicity and safety peptides

Database_Source

Peptipedia

Sequence_Type

standard

Has_Modification No

Description A 63-aa standard natural toxicity peptide sequence curated from Peptipedia, with an available 3D structural model.

Sequence

MLCLPVFIILLLLVSPAATLPVTSKLHGLLTRRSLKNFWKRNLYLRDEDWVDCCQMGDCCDEK

FASTA

>TPDB34810|Toxicity|length=63
MLCLPVFIILLLLVSPAATLPVTSKLHGLLTRRSLKNFWKRNLYLRDEDWVDCCQMGDCCDEK

Formula C327H528N86O88S7

Absent Amino Acids

Common Amino Acids L

Mass 7296.73

PI 7.73

Basic Residues 9

Acidic Residues 7

Hydrophobic Residues 28

Net Charge +1

Boman Index 5.43

Hydrophobicity 0.249

Aliphatic Index 114.44

Half Life

Mammalian: 30 hour Yeast: >20 hour E.coli: >10 hour

Extinction Coefficient Cystines 12740

Absorbance 280nm 174.60

Polar Residues 15

number

2

A

4

R

2

N

5

D

5

C

2

E

1

Q

2

G

1

H

2

I

13

L

4

K

2

M

2

F

3

P

3

S

3

T

2

W

1

Y

4

V

Amino Acid Distribution

A: 2 R: 4 N: 2 D: 5 C: 5 E: 2 Q: 1 G: 2 H: 1 I: 2 L: 13 K: 4 M: 2 F: 2 P: 3 S: 3 T: 3 W: 2 Y: 1 V: 4

Length

63

Formula

C327H528N86O88S7

Mass

7296.73

PI

7.73

Net Charge

+1

Boman Index

5.43

Hydrophobicity

0.249

Evidence 1 Activity

Source & Reference

Database Source NA