TPDB

3D PDB MODEL

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TPDB ID TPDB34754

Activity

Neurotoxin Toxicity

Activity_category_statistics

Toxicity and safety peptides

Database_Source

Peptipedia

Sequence_Type

standard

Has_Modification No

Description A 85-aa standard natural multi-activity (Neurotoxin and Toxicity) peptide sequence curated from Peptipedia, with an available 3D structural model.

Sequence

MKVTLIAIVTCAAVLVLHTTAAEELEAESQLMEVGMPDTELAAVDEERLFECSASCEIEKEGNKDCKKKKCKGGWKCKFNMCVKV

FASTA

>TPDB34754|Neurotoxin;Toxicity|length=85
MKVTLIAIVTCAAVLVLHTTAAEELEAESQLMEVGMPDTELAAVDEERLFECSASCEIEKEGNKDCKKKKCKGGWKCKFNMCVKV

Formula C402H667N105O127S11

Absent Amino Acids Y

Common Amino Acids E

Mass 9356.01

PI 4.98

Basic Residues 13

Acidic Residues 15

Hydrophobic Residues 34

Net Charge -3

Boman Index 31.06

Hydrophobicity -0.035

Aliphatic Index 83.76

Half Life

Mammalian: 30 hour Yeast: >20 hour E.coli: >10 hour

Extinction Coefficient Cystines 5875

Absorbance 280nm 62.79

Polar Residues 18

number

9

A

1

R

2

N

3

D

7

C

12

E

1

Q

4

G

1

H

3

I

7

L

11

K

4

M

2

F

1

P

3

S

5

T

1

W

0

Y

8

V

Amino Acid Distribution

A: 9 R: 1 N: 2 D: 3 C: 7 E: 12 Q: 1 G: 4 H: 1 I: 3 L: 7 K: 11 M: 4 F: 2 P: 1 S: 3 T: 5 W: 1 Y: 0 V: 8

Length

85

Formula

C402H667N105O127S11

Mass

9356.01

PI

4.98

Net Charge

-3

Boman Index

31.06

Hydrophobicity

-0.035

Evidence 1 Activity

Source & Reference

Database Source NA