TPDB

3D PDB MODEL

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TPDB ID TPDB34536

Activity

Toxicity

Activity_category_statistics

Toxicity and safety peptides

Database_Source

Peptipedia

Sequence_Type

standard

Has_Modification No

Description A 97-aa standard natural toxicity peptide sequence curated from Peptipedia, with an available 3D structural model.

Sequence

MKLTCMMIVAVLFLTAWTFVTADDSRNGMENLFPKAGHEMENLEDSKHRHQERPDTGDKEEMLLQRQVKPCRKEHQLCDLIFQNCCRGWYCVVLSCT

FASTA

>TPDB34536|Toxicity|length=97
MKLTCMMIVAVLFLTAWTFVTADDSRNGMENLFPKAGHEMENLEDSKHRHQERPDTGDKEEMLLQRQVKPCRKEHQLCDLIFQNCCRGWYCVVLSCT

Formula C489H774N140O145S13

Absent Amino Acids

Common Amino Acids L

Mass 11351.16

PI 6.05

Basic Residues 16

Acidic Residues 14

Hydrophobic Residues 35

Net Charge -2

Boman Index 26.68

Hydrophobicity -0.415

Aliphatic Index 70.31

Half Life

Mammalian: 30 hour Yeast: >20 hour E.coli: >10 hour

Extinction Coefficient Cystines 12865

Absorbance 280nm 113.34

Polar Residues 26

number

4

A

6

R

4

N

6

D

7

C

8

E

5

Q

4

G

4

H

2

I

10

L

6

K

6

M

4

F

3

P

3

S

6

T

2

W

1

Y

6

V

Amino Acid Distribution

A: 4 R: 6 N: 4 D: 6 C: 7 E: 8 Q: 5 G: 4 H: 4 I: 2 L: 10 K: 6 M: 6 F: 4 P: 3 S: 3 T: 6 W: 2 Y: 1 V: 6

Length

97

Formula

C489H774N140O145S13

Mass

11351.16

PI

6.05

Net Charge

-2

Boman Index

26.68

Hydrophobicity

-0.415

Evidence 1 Activity

Source & Reference

Database Source NA