TPDB

3D PDB MODEL

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TPDB ID TPDB34424

Activity

Toxicity

Activity_category_statistics

Toxicity and safety peptides

Database_Source

Peptipedia

Sequence_Type

modified_plain

Has_Modification Yes

Description A 77-aa modified toxicity peptide sequence curated from Peptipedia, with an available 3D structural model.

Modification

Modified, details unspecified

Sequence

MKLTCVLIVAVLXLTACQLIAADDSRDLKRFSRRKMRDGMLNTKNMKRQCLPPLSLCTMDDDECCDDCXLFLCLVTS

FASTA

>TPDB34424|Toxicity|length=77
MKLTCVLIVAVLXLTACQLIAADDSRDLKRFSRRKMRDGMLNTKNMKRQCLPPLSLCTMDDDECCDDCXLFLCLVTS

Formula C358H610N102O109S13

Absent Amino Acids HWY

Common Amino Acids L

Mass 8504.18

PI 7.48

Basic Residues 11

Acidic Residues 10

Hydrophobic Residues 30

Net Charge +1

Boman Index 13.40

Hydrophobicity 0.152

Aliphatic Index 96.23

Half Life

Mammalian: 30 hour Yeast: >20 hour E.coli: >10 hour

Extinction Coefficient Cystines 500

Absorbance 280nm 5.88

Polar Residues 21

number

4

A

6

R

2

N

9

D

8

C

1

E

2

Q

1

G

0

H

2

I

13

L

5

K

5

M

2

F

2

P

4

S

5

T

0

W

0

Y

4

V

Amino Acid Distribution

A: 4 R: 6 N: 2 D: 9 C: 8 E: 1 Q: 2 G: 1 H: 0 I: 2 L: 13 K: 5 M: 5 F: 2 P: 2 S: 4 T: 5 W: 0 Y: 0 V: 4

Length

77

Formula

C358H610N102O109S13

Mass

8504.18

PI

7.48

Net Charge

+1

Boman Index

13.40

Hydrophobicity

0.152

Evidence 1 Activity

Source & Reference

Database Source NA