TPDB

3D PDB MODEL

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TPDB ID TPDB34377

Activity

Toxicity

Activity_category_statistics

Toxicity and safety peptides

Database_Source

Peptipedia

Sequence_Type

standard

Has_Modification No

Description A 97-aa standard natural toxicity peptide sequence curated from Peptipedia, with an available 3D structural model.

Sequence

MKLTCLLIIAVLFLTAWTFVTADDSGNGMENLFPKARHEMENLEDSKHRHQERPDTGDKEEMLLQRQVKPCRKEHQLCDLIFQNCCRGWYCLLRPCI

FASTA

>TPDB34377|Toxicity|length=97
MKLTCLLIIAVLFLTAWTFVTADDSGNGMENLFPKARHEMENLEDSKHRHQERPDTGDKEEMLLQRQVKPCRKEHQLCDLIFQNCCRGWYCLLRPCI

Formula C498H791N143O143S11

Absent Amino Acids

Common Amino Acids L

Mass 11422.29

PI 6.46

Basic Residues 17

Acidic Residues 14

Hydrophobic Residues 35

Net Charge -1

Boman Index 25.62

Hydrophobicity -0.422

Aliphatic Index 81.44

Half Life

Mammalian: 30 hour Yeast: >20 hour E.coli: >10 hour

Extinction Coefficient Cystines 12865

Absorbance 280nm 112.63

Polar Residues 24

number

4

A

7

R

4

N

6

D

7

C

8

E

5

Q

4

G

4

H

4

I

13

L

6

K

4

M

4

F

4

P

2

S

5

T

2

W

1

Y

3

V

Amino Acid Distribution

A: 4 R: 7 N: 4 D: 6 C: 7 E: 8 Q: 5 G: 4 H: 4 I: 4 L: 13 K: 6 M: 4 F: 4 P: 4 S: 2 T: 5 W: 2 Y: 1 V: 3

Length

97

Formula

C498H791N143O143S11

Mass

11422.29

PI

6.46

Net Charge

-1

Boman Index

25.62

Hydrophobicity

-0.422

Evidence 1 Activity

Source & Reference

Database Source NA