TPDB

3D PDB MODEL

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TPDB ID TPDB34323

Activity

Toxicity

Activity_category_statistics

Toxicity and safety peptides

Database_Source

Peptipedia

Sequence_Type

standard

Has_Modification No

Description A 69-aa standard natural toxicity peptide sequence curated from Peptipedia, with an available 3D structural model.

Sequence

MKLCVTFLLVLVILPSVTGEKSSERTRIGAVLKGHWCGYPGERGCRYHSQCCGDMCCYDRKCVVTAMPC

FASTA

>TPDB34323|Toxicity|length=69
MKLCVTFLLVLVILPSVTGEKSSERTRIGAVLKGHWCGYPGERGCRYHSQCCGDMCCYDRKCVVTAMPC

Formula C329H532N94O92S12

Absent Amino Acids N

Common Amino Acids C

Mass 7661.14

PI 8.22

Basic Residues 11

Acidic Residues 5

Hydrophobic Residues 25

Net Charge +4

Boman Index 9.05

Hydrophobicity 0.172

Aliphatic Index 77.54

Half Life

Mammalian: 30 hour Yeast: >20 hour E.coli: >10 hour

Extinction Coefficient Cystines 10470

Absorbance 280nm 136.66

Polar Residues 21

number

2

A

5

R

0

N

2

D

9

C

3

E

1

Q

7

G

2

H

2

I

6

L

4

K

3

M

1

F

3

P

4

S

4

T

1

W

3

Y

7

V

Amino Acid Distribution

A: 2 R: 5 N: 0 D: 2 C: 9 E: 3 Q: 1 G: 7 H: 2 I: 2 L: 6 K: 4 M: 3 F: 1 P: 3 S: 4 T: 4 W: 1 Y: 3 V: 7

Length

69

Formula

C329H532N94O92S12

Mass

7661.14

PI

8.22

Net Charge

+4

Boman Index

9.05

Hydrophobicity

0.172

Evidence 1 Activity

Source & Reference

Database Source NA