TPDB

3D PDB MODEL

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TPDB ID TPDB34287

Activity

Toxicity

Activity_category_statistics

Toxicity and safety peptides

Database_Source

Peptipedia

Sequence_Type

standard

Has_Modification No

Description A 76-aa standard natural toxicity peptide sequence curated from Peptipedia, with an available 3D structural model.

Sequence

MKKLTILLLVAALLMSAQALIQGGVEKRQKAKMDFSKRKTTAEKWWDGDCMTWYAPCRLDSQCCSGNCGKHRCLAW

FASTA

>TPDB34287|Toxicity|length=76
MKKLTILLLVAALLMSAQALIQGGVEKRQKAKMDFSKRKTTAEKWWDGDCMTWYAPCRLDSQCCSGNCGKHRCLAW

Formula C377H610N108O103S10

Absent Amino Acids

Common Amino Acids LK

Mass 8624.25

PI 9.49

Basic Residues 14

Acidic Residues 6

Hydrophobic Residues 31

Net Charge +7

Boman Index 7.68

Hydrophobicity -0.236

Aliphatic Index 74.61

Half Life

Mammalian: 30 hour Yeast: >20 hour E.coli: >10 hour

Extinction Coefficient Cystines 23865

Absorbance 280nm 276.72

Polar Residues 20

number

8

A

4

R

1

N

4

D

6

C

2

E

4

Q

5

G

1

H

2

I

9

L

9

K

4

M

1

F

1

P

4

S

4

T

4

W

1

Y

2

V

Amino Acid Distribution

A: 8 R: 4 N: 1 D: 4 C: 6 E: 2 Q: 4 G: 5 H: 1 I: 2 L: 9 K: 9 M: 4 F: 1 P: 1 S: 4 T: 4 W: 4 Y: 1 V: 2

Length

76

Formula

C377H610N108O103S10

Mass

8624.25

PI

9.49

Net Charge

+7

Boman Index

7.68

Hydrophobicity

-0.236

Evidence 1 Activity

Source & Reference

Database Source NA