TPDB

3D PDB MODEL

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TPDB ID TPDB34188

Activity

Toxicity

Activity_category_statistics

Toxicity and safety peptides

Database_Source

Peptipedia

Sequence_Type

standard

Has_Modification No

Description A 132-aa standard natural toxicity peptide sequence curated from Peptipedia, with an available 3D structural model.

Sequence

MKFIIAIAVCTLAVVCVSGEPKKHDYQNEFDFLLMQRIHDQMRKGEEALLHLHQINTFEENPTKEMKEQILASEMDTIIALIDGVRGVLNRLMKRTDLDIFERYNVEIALKSNEILERDLKKEEQRVKKIEV

FASTA

>TPDB34188|Toxicity|length=132
MKFIIAIAVCTLAVVCVSGEPKKHDYQNEFDFLLMQRIHDQMRKGEEALLHLHQINTFEENPTKEMKEQILASEMDTIIALIDGVRGVLNRLMKRTDLDIFERYNVEIALKSNEILERDLKKEEQRVKKIEV

Formula C684H1122N188O203S8

Absent Amino Acids W

Common Amino Acids E

Mass 15484.05

PI 5.52

Basic Residues 24

Acidic Residues 24

Hydrophobic Residues 56

Net Charge -4

Boman Index 50.57

Hydrophobicity -0.321

Aliphatic Index 104.85

Half Life

Mammalian: 30 hour Yeast: >20 hour E.coli: >10 hour

Extinction Coefficient Cystines 3105

Absorbance 280nm 20.05

Polar Residues 24

number

7

A

8

R

6

N

8

D

2

C

16

E

6

Q

4

G

4

H

13

I

14

L

12

K

6

M

5

F

2

P

3

S

5

T

0

W

2

Y

9

V

Amino Acid Distribution

A: 7 R: 8 N: 6 D: 8 C: 2 E: 16 Q: 6 G: 4 H: 4 I: 13 L: 14 K: 12 M: 6 F: 5 P: 2 S: 3 T: 5 W: 0 Y: 2 V: 9

Length

132

Formula

C684H1122N188O203S8

Mass

15484.05

PI

5.52

Net Charge

-4

Boman Index

50.57

Hydrophobicity

-0.321

Evidence 1 Activity

Source & Reference

Database Source NA