TPDB

3D PDB MODEL

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TPDB ID TPDB33987

Activity

Toxicity

Activity_category_statistics

Toxicity and safety peptides

Database_Source

Peptipedia

Sequence_Type

standard

Has_Modification No

Description A 71-aa standard natural toxicity peptide sequence curated from Peptipedia, with an available 3D structural model.

Sequence

MGVVLFTFLVLFPLATLQLDADQPVERYVENKQDLSPDDRMGFILLALRRYECCVWPHCDGGCSSCVRSCE

FASTA

>TPDB33987|Toxicity|length=71
MGVVLFTFLVLFPLATLQLDADQPVERYVENKQDLSPDDRMGFILLALRRYECCVWPHCDGGCSSCVRSCE

Formula C356H554N94O104S8

Absent Amino Acids

Common Amino Acids L

Mass 8071.36

PI 4.40

Basic Residues 7

Acidic Residues 10

Hydrophobic Residues 30

Net Charge -4

Boman Index 10.18

Hydrophobicity 0.177

Aliphatic Index 93.24

Half Life

Mammalian: 30 hour Yeast: >20 hour E.coli: >10 hour

Extinction Coefficient Cystines 8855

Absorbance 280nm 109.71

Polar Residues 18

number

3

A

5

R

1

N

6

D

6

C

4

E

3

Q

4

G

1

H

1

I

10

L

1

K

2

M

4

F

4

P

4

S

2

T

1

W

2

Y

7

V

Amino Acid Distribution

A: 3 R: 5 N: 1 D: 6 C: 6 E: 4 Q: 3 G: 4 H: 1 I: 1 L: 10 K: 1 M: 2 F: 4 P: 4 S: 4 T: 2 W: 1 Y: 2 V: 7

Length

71

Formula

C356H554N94O104S8

Mass

8071.36

PI

4.40

Net Charge

-4

Boman Index

10.18

Hydrophobicity

0.177

Evidence 1 Activity

Source & Reference

Database Source NA