TPDB

3D PDB MODEL

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TPDB ID TPDB33810

Activity

Toxicity

Activity_category_statistics

Toxicity and safety peptides

Database_Source

Peptipedia

Sequence_Type

standard

Has_Modification No

Description A 72-aa standard natural toxicity peptide sequence curated from Peptipedia, with an available 3D structural model.

Sequence

MEKKMAGFCIFFLVLFLAQEYGVEGKVCLNLSDKFKGPCLGTKNCDHHCRDIEHLLSGVCRDDFRCWCNRNC

FASTA

>TPDB33810|Toxicity|length=72
MEKKMAGFCIFFLVLFLAQEYGVEGKVCLNLSDKFKGPCLGTKNCDHHCRDIEHLLSGVCRDDFRCWCNRNC

Formula C363H562N102O100S11

Absent Amino Acids

Common Amino Acids C

Mass 8307.74

PI 7.47

Basic Residues 13

Acidic Residues 9

Hydrophobic Residues 26

Net Charge +1

Boman Index 12.11

Hydrophobicity -0.078

Aliphatic Index 73.06

Half Life

Mammalian: 30 hour Yeast: >20 hour E.coli: >10 hour

Extinction Coefficient Cystines 7490

Absorbance 280nm 90.16

Polar Residues 18

number

2

A

4

R

4

N

5

D

9

C

4

E

1

Q

6

G

3

H

2

I

8

L

6

K

2

M

6

F

1

P

2

S

1

T

1

W

1

Y

4

V

Amino Acid Distribution

A: 2 R: 4 N: 4 D: 5 C: 9 E: 4 Q: 1 G: 6 H: 3 I: 2 L: 8 K: 6 M: 2 F: 6 P: 1 S: 2 T: 1 W: 1 Y: 1 V: 4

Length

72

Formula

C363H562N102O100S11

Mass

8307.74

PI

7.47

Net Charge

+1

Boman Index

12.11

Hydrophobicity

-0.078

Evidence 1 Activity

Source & Reference

Database Source NA