TPDB

3D PDB MODEL

Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber.

TPDB ID TPDB33766

Activity

Toxicity

Activity_category_statistics

Toxicity and safety peptides

Database_Source

Peptipedia

Sequence_Type

standard

Has_Modification No

Description A 36-aa standard natural toxicity peptide sequence curated from Peptipedia, with an available 3D structural model.

Sequence

MCLSLGQRCERHSNCCGYLCCFYDKCVVTAIGCGHY

FASTA

>TPDB33766|Toxicity|length=36
MCLSLGQRCERHSNCCGYLCCFYDKCVVTAIGCGHY

Formula C168H259N49O49S9

Absent Amino Acids PW

Common Amino Acids C

Mass 4037.74

PI 7.51

Basic Residues 5

Acidic Residues 2

Hydrophobic Residues 12

Net Charge +1

Boman Index 1.10

Hydrophobicity 0.269

Aliphatic Index 62.22

Half Life

Mammalian: 30 hour Yeast: >20 hour E.coli: >10 hour

Extinction Coefficient Cystines 4970

Absorbance 280nm 123.09

Polar Residues 16

number

1

A

2

R

1

N

1

D

8

C

1

E

1

Q

4

G

2

H

1

I

3

L

1

K

1

M

1

F

0

P

2

S

1

T

0

W

3

Y

2

V

Amino Acid Distribution

A: 1 R: 2 N: 1 D: 1 C: 8 E: 1 Q: 1 G: 4 H: 2 I: 1 L: 3 K: 1 M: 1 F: 1 P: 0 S: 2 T: 1 W: 0 Y: 3 V: 2

Length

36

Formula

C168H259N49O49S9

Mass

4037.74

PI

7.51

Net Charge

+1

Boman Index

1.10

Hydrophobicity

0.269

Evidence 1 Activity

Source & Reference

Database Source NA