TPDB

3D PDB MODEL

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TPDB ID TPDB33550

Activity

Toxicity

Activity_category_statistics

Toxicity and safety peptides

Database_Source

Peptipedia

Sequence_Type

standard

Has_Modification No

Description A 65-aa standard natural toxicity peptide sequence curated from Peptipedia, with an available 3D structural model.

Sequence

LTCLICPEKYCNKVHTCLNGEKICFKKYDQRKLLGKGYIRGCADTCPKLQNRDVIFCCSTDKCNL

FASTA

>TPDB33550|Toxicity|length=65
LTCLICPEKYCNKVHTCLNGEKICFKKYDQRKLLGKGYIRGCADTCPKLQNRDVIFCCSTDKCNL

Formula C321H525N91O92S10

Absent Amino Acids MW

Common Amino Acids C

Mass 7451.85

PI 8.47

Basic Residues 13

Acidic Residues 6

Hydrophobic Residues 19

Net Charge +6

Boman Index 13.06

Hydrophobicity -0.318

Aliphatic Index 76.46

Half Life

Mammalian: 5.5 hour Yeast: 3 min E.coli: 2 min

Extinction Coefficient Cystines 5095

Absorbance 280nm 68.37

Polar Residues 24

number

1

A

3

R

4

N

4

D

10

C

2

E

2

Q

4

G

1

H

4

I

7

L

9

K

0

M

2

F

2

P

1

S

4

T

0

W

3

Y

2

V

Amino Acid Distribution

A: 1 R: 3 N: 4 D: 4 C: 10 E: 2 Q: 2 G: 4 H: 1 I: 4 L: 7 K: 9 M: 0 F: 2 P: 2 S: 1 T: 4 W: 0 Y: 3 V: 2

Length

65

Formula

C321H525N91O92S10

Mass

7451.85

PI

8.47

Net Charge

+6

Boman Index

13.06

Hydrophobicity

-0.318

Evidence 1 Activity

Source & Reference

Database Source NA