TPDB

3D PDB MODEL

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TPDB ID TPDB33392

Activity

Toxicity

Activity_category_statistics

Toxicity and safety peptides

Database_Source

Peptipedia

Sequence_Type

modified_plain

Has_Modification Yes

Description A 86-aa modified toxicity peptide sequence curated from Peptipedia, with an available 3D structural model.

Modification

Modified, details unspecified

Sequence

LPNPSGFVTCLSSISKSVYTPAINLKAVIADPVAKTAVVQAGATLGEVYYXIIYARVLWVGNTTQKLEWIRSLHDYQSSFFPFFSA

FASTA

>TPDB33392|Toxicity|length=86
LPNPSGFVTCLSSISKSVYTPAINLKAVIADPVAKTAVVQAGATLGEVYYXIIYARVLWVGNTTQKLEWIRSLHDYQSSFFPFFSA

Formula C436H665N105O120S1

Absent Amino Acids M

Common Amino Acids ASV

Mass 9329.77

PI 9.24

Basic Residues 7

Acidic Residues 4

Hydrophobic Residues 43

Net Charge +2

Boman Index -0.63

Hydrophobicity 0.372

Aliphatic Index 99.77

Half Life

Mammalian: 5.5 hour Yeast: 3 min E.coli: 2 min

Extinction Coefficient Cystines 18450

Absorbance 280nm 197.75

Polar Residues 27

number

9

A

2

R

3

N

2

D

1

C

2

E

3

Q

4

G

1

H

6

I

7

L

4

K

0

M

5

F

5

P

9

S

6

T

2

W

5

Y

9

V

Amino Acid Distribution

A: 9 R: 2 N: 3 D: 2 C: 1 E: 2 Q: 3 G: 4 H: 1 I: 6 L: 7 K: 4 M: 0 F: 5 P: 5 S: 9 T: 6 W: 2 Y: 5 V: 9

Length

86

Formula

C436H665N105O120S1

Mass

9329.77

PI

9.24

Net Charge

+2

Boman Index

-0.63

Hydrophobicity

0.372

Evidence 1 Activity

Source & Reference

Database Source NA