TPDB

3D PDB MODEL

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TPDB ID TPDB32764

Activity

Toxicity

Activity_category_statistics

Toxicity and safety peptides

Database_Source

Peptipedia

Sequence_Type

modified_plain

Has_Modification Yes

Description A 30-aa modified toxicity peptide sequence curated from Peptipedia, with an available 3D structural model.

Modification

Modified, details unspecified

Sequence

KFLSGGFKEIVCHRYCAKGIAKEFCNCPDX

FASTA

>TPDB32764|Toxicity|length=30
KFLSGGFKEIVCHRYCAKGIAKEFCNCPDX

Formula C145H223N39O39S4

Absent Amino Acids QMTW

Common Amino Acids CK

Mass 3264.84

PI 8.30

Basic Residues 6

Acidic Residues 3

Hydrophobic Residues 10

Net Charge +2

Boman Index 5.29

Hydrophobicity -0.107

Aliphatic Index 55.33

Half Life

Mammalian: 1.3 hour Yeast: 3 min E.coli: 2 min

Extinction Coefficient Cystines 1740

Absorbance 280nm 53.30

Polar Residues 7

number

2

A

1

R

1

N

1

D

4

C

2

E

0

Q

3

G

1

H

2

I

1

L

4

K

0

M

3

F

1

P

1

S

0

T

0

W

1

Y

1

V

Amino Acid Distribution

A: 2 R: 1 N: 1 D: 1 C: 4 E: 2 Q: 0 G: 3 H: 1 I: 2 L: 1 K: 4 M: 0 F: 3 P: 1 S: 1 T: 0 W: 0 Y: 1 V: 1

Length

30

Formula

C145H223N39O39S4

Mass

3264.84

PI

8.30

Net Charge

+2

Boman Index

5.29

Hydrophobicity

-0.107

Evidence 1 Activity

Source & Reference

Database Source NA