TPDB

3D PDB MODEL

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TPDB ID TPDB32584

Activity

Toxicity

Activity_category_statistics

Toxicity and safety peptides

Database_Source

Peptipedia

Sequence_Type

modified_plain

Has_Modification Yes

Description A 27-aa modified toxicity peptide sequence curated from Peptipedia, with an available 3D structural model.

Modification

Modified, details unspecified

Sequence

JSCSWPFDACTSDRQCCSGHCIGHSYC

FASTA

>TPDB32584|Toxicity|length=27
JSCSWPFDACTSDRQCCSGHCIGHSYC

Formula C115H165N35O39S6

Absent Amino Acids NELKMV

Common Amino Acids C

Mass 2854.15

PI 5.99

Basic Residues 3

Acidic Residues 2

Hydrophobic Residues 5

Net Charge -1

Boman Index 1.19

Hydrophobicity -0.244

Aliphatic Index 18.15

Half Life

Mammalian: Yeast: E.coli:

Extinction Coefficient Cystines 7365

Absorbance 280nm 258.05

Polar Residues 14

number

1

A

1

R

0

N

2

D

6

C

0

E

1

Q

2

G

2

H

1

I

0

L

0

K

0

M

1

F

1

P

5

S

1

T

1

W

1

Y

0

V

Amino Acid Distribution

A: 1 R: 1 N: 0 D: 2 C: 6 E: 0 Q: 1 G: 2 H: 2 I: 1 L: 0 K: 0 M: 0 F: 1 P: 1 S: 5 T: 1 W: 1 Y: 1 V: 0

Length

27

Formula

C115H165N35O39S6

Mass

2854.15

PI

5.99

Net Charge

-1

Boman Index

1.19

Hydrophobicity

-0.244

Evidence 1 Activity

Source & Reference

Database Source NA