TPDB

3D PDB MODEL

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TPDB ID TPDB32537

Activity

Toxicity

Activity_category_statistics

Toxicity and safety peptides

Database_Source

Peptipedia

Sequence_Type

modified_plain

Has_Modification Yes

Description A 51-aa modified toxicity peptide sequence curated from Peptipedia, with an available 3D structural model.

Modification

Modified, details unspecified

Sequence

JGLVNNFPCYSDQCACLPKHGTSTSYVCQSIESGRAGCWDDECKTEGEWGZ

FASTA

>TPDB32537|Toxicity|length=51
JGLVNNFPCYSDQCACLPKHGTSTSYVCQSIESGRAGCWDDECKTEGEWGZ

Formula C224H332N62O78S6

Absent Amino Acids M

Common Amino Acids CG

Mass 5333.83

PI 4.21

Basic Residues 4

Acidic Residues 7

Hydrophobic Residues 12

Net Charge -4

Boman Index 9.77

Hydrophobicity -0.553

Aliphatic Index 38.24

Half Life

Mammalian: Yeast: E.coli:

Extinction Coefficient Cystines 14355

Absorbance 280nm 269.13

Polar Residues 20

number

2

A

1

R

2

N

3

D

6

C

4

E

2

Q

6

G

1

H

1

I

2

L

2

K

0

M

1

F

2

P

5

S

3

T

2

W

2

Y

2

V

Amino Acid Distribution

A: 2 R: 1 N: 2 D: 3 C: 6 E: 4 Q: 2 G: 6 H: 1 I: 1 L: 2 K: 2 M: 0 F: 1 P: 2 S: 5 T: 3 W: 2 Y: 2 V: 2

Length

51

Formula

C224H332N62O78S6

Mass

5333.83

PI

4.21

Net Charge

-4

Boman Index

9.77

Hydrophobicity

-0.553

Evidence 1 Activity

Source & Reference

Database Source NA