TPDB

3D PDB MODEL

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TPDB ID TPDB32246

Activity

Toxicity

Activity_category_statistics

Toxicity and safety peptides

Database_Source

Peptipedia

Sequence_Type

standard

Has_Modification No

Description A 22-aa standard natural toxicity peptide sequence curated from Peptipedia, with an available 3D structural model.

Sequence

ICETDAHYVQIIHTSNNLGTER

FASTA

>TPDB32246|Toxicity|length=22
ICETDAHYVQIIHTSNNLGTER

Formula C106H168N32O37S1

Absent Amino Acids KMFPW

Common Amino Acids IT

Mass 2514.75

PI 5.17

Basic Residues 3

Acidic Residues 3

Hydrophobic Residues 7

Net Charge -2

Boman Index 7.21

Hydrophobicity -0.486

Aliphatic Index 88.64

Half Life

Mammalian: 20 hour Yeast: 30 min E.coli: >10 hour

Extinction Coefficient Cystines 1490

Absorbance 280nm 59.25

Polar Residues 9

number

1

A

1

R

2

N

1

D

1

C

2

E

1

Q

1

G

2

H

3

I

1

L

0

K

0

M

0

F

0

P

1

S

3

T

0

W

1

Y

1

V

Amino Acid Distribution

A: 1 R: 1 N: 2 D: 1 C: 1 E: 2 Q: 1 G: 1 H: 2 I: 3 L: 1 K: 0 M: 0 F: 0 P: 0 S: 1 T: 3 W: 0 Y: 1 V: 1

Length

22

Formula

C106H168N32O37S1

Mass

2514.75

PI

5.17

Net Charge

-2

Boman Index

7.21

Hydrophobicity

-0.486

Evidence 1 Activity

Source & Reference

Database Source NA