TPDB

3D PDB MODEL

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TPDB ID TPDB31792

Activity

Toxicity

Activity_category_statistics

Toxicity and safety peptides

Database_Source

Peptipedia

Sequence_Type

modified_plain

Has_Modification Yes

Description A 26-aa modified toxicity peptide sequence curated from Peptipedia, with an available 3D structural model.

Modification

Modified, details unspecified

Sequence

GPGSAICNMACRLEHGHLYPFCHCRX

FASTA

>TPDB31792|Toxicity|length=26
GPGSAICNMACRLEHGHLYPFCHCRX

Formula C117H178N38O31S5

Absent Amino Acids DQKTWV

Common Amino Acids C

Mass 2773.24

PI 7.86

Basic Residues 5

Acidic Residues 1

Hydrophobic Residues 8

Net Charge +1

Boman Index 2.97

Hydrophobicity -0.065

Aliphatic Index 52.69

Half Life

Mammalian: 30 hour Yeast: >20 hour E.coli: >10 hour

Extinction Coefficient Cystines 1740

Absorbance 280nm 62.74

Polar Residues 7

number

2

A

2

R

1

N

0

D

4

C

1

E

0

Q

3

G

3

H

1

I

2

L

0

K

1

M

1

F

2

P

1

S

0

T

0

W

1

Y

0

V

Amino Acid Distribution

A: 2 R: 2 N: 1 D: 0 C: 4 E: 1 Q: 0 G: 3 H: 3 I: 1 L: 2 K: 0 M: 1 F: 1 P: 2 S: 1 T: 0 W: 0 Y: 1 V: 0

Length

26

Formula

C117H178N38O31S5

Mass

2773.24

PI

7.86

Net Charge

+1

Boman Index

2.97

Hydrophobicity

-0.065

Evidence 1 Activity

Source & Reference

Database Source NA