TPDB

3D PDB MODEL

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TPDB ID TPDB31555

Activity

Toxicity

Activity_category_statistics

Toxicity and safety peptides

Database_Source

Peptipedia

Sequence_Type

modified_plain

Has_Modification Yes

Description A 36-aa modified toxicity peptide sequence curated from Peptipedia, with an available 3D structural model.

Modification

Modified, details unspecified

Sequence

GGCLPHNRFCNALSGPRCCSGLKCKELSIYDSRCLZ

FASTA

>TPDB31555|Toxicity|length=36
GGCLPHNRFCNALSGPRCCSGLKCKELSIYDSRCLZ

Formula C158H258N50O47S6

Absent Amino Acids QMTWV

Common Amino Acids C

Mass 3802.45

PI 8.31

Basic Residues 6

Acidic Residues 2

Hydrophobic Residues 9

Net Charge +3

Boman Index 4.13

Hydrophobicity -0.131

Aliphatic Index 67.78

Half Life

Mammalian: 30 hour Yeast: >20 hour E.coli: >10 hour

Extinction Coefficient Cystines 1865

Absorbance 280nm 49.05

Polar Residues 13

number

1

A

3

R

2

N

1

D

6

C

1

E

0

Q

4

G

1

H

1

I

5

L

2

K

0

M

1

F

2

P

4

S

0

T

0

W

1

Y

0

V

Amino Acid Distribution

A: 1 R: 3 N: 2 D: 1 C: 6 E: 1 Q: 0 G: 4 H: 1 I: 1 L: 5 K: 2 M: 0 F: 1 P: 2 S: 4 T: 0 W: 0 Y: 1 V: 0

Length

36

Formula

C158H258N50O47S6

Mass

3802.45

PI

8.31

Net Charge

+3

Boman Index

4.13

Hydrophobicity

-0.131

Evidence 1 Activity

Source & Reference

Database Source NA