TPDB

3D PDB MODEL

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TPDB ID TPDB30571

Activity

Toxicity

Activity_category_statistics

Toxicity and safety peptides

Database_Source

Peptipedia

Sequence_Type

standard

Has_Modification No

Description A 40-aa standard natural toxicity peptide sequence curated from Peptipedia, with an available 3D structural model.

Sequence

EYCTIKTIGDKSVYLSRICCAEAKAIVGCSLHHTFHETQP

FASTA

>TPDB30571|Toxicity|length=40
EYCTIKTIGDKSVYLSRICCAEAKAIVGCSLHHTFHETQP

Formula C194H307N53O59S4

Absent Amino Acids NMW

Common Amino Acids CIT

Mass 4454.13

PI 7.10

Basic Residues 7

Acidic Residues 4

Hydrophobic Residues 14

Net Charge +0

Boman Index 9.25

Hydrophobicity -0.032

Aliphatic Index 80.50

Half Life

Mammalian: 1 hour Yeast: 30 min E.coli: >10 hour

Extinction Coefficient Cystines 3230

Absorbance 280nm 72.52

Polar Residues 14

number

3

A

1

R

0

N

1

D

4

C

3

E

1

Q

2

G

3

H

4

I

2

L

3

K

0

M

1

F

1

P

3

S

4

T

0

W

2

Y

2

V

Amino Acid Distribution

A: 3 R: 1 N: 0 D: 1 C: 4 E: 3 Q: 1 G: 2 H: 3 I: 4 L: 2 K: 3 M: 0 F: 1 P: 1 S: 3 T: 4 W: 0 Y: 2 V: 2

Length

40

Formula

C194H307N53O59S4

Mass

4454.13

PI

7.10

Net Charge

+0

Boman Index

9.25

Hydrophobicity

-0.032

Evidence 1 Activity

Source & Reference

Database Source NA