TPDB

3D PDB MODEL

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TPDB ID TPDB30095

Activity

Toxicity

Activity_category_statistics

Toxicity and safety peptides

Database_Source

Peptipedia

Sequence_Type

modified_plain

Has_Modification Yes

Description A 26-aa modified toxicity peptide sequence curated from Peptipedia, with an available 3D structural model.

Modification

Modified, details unspecified

Sequence

DWKNTAKEWGKKVGEALLDCAKQKMZ

FASTA

>TPDB30095|Toxicity|length=26
DWKNTAKEWGKKVGEALLDCAKQKMZ

Formula C127H205N35O37S2

Absent Amino Acids RHIFPSY

Common Amino Acids K

Mass 2878.36

PI 9.57

Basic Residues 6

Acidic Residues 4

Hydrophobic Residues 9

Net Charge +2

Boman Index 7.87

Hydrophobicity -1.004

Aliphatic Index 52.69

Half Life

Mammalian: 1.1 hour Yeast: 3 min E.coli: >10 hour

Extinction Coefficient Cystines 11000

Absorbance 280nm 382.16

Polar Residues 4

number

3

A

0

R

1

N

2

D

1

C

2

E

1

Q

2

G

0

H

0

I

2

L

6

K

1

M

0

F

0

P

0

S

1

T

2

W

0

Y

1

V

Amino Acid Distribution

A: 3 R: 0 N: 1 D: 2 C: 1 E: 2 Q: 1 G: 2 H: 0 I: 0 L: 2 K: 6 M: 1 F: 0 P: 0 S: 0 T: 1 W: 2 Y: 0 V: 1

Length

26

Formula

C127H205N35O37S2

Mass

2878.36

PI

9.57

Net Charge

+2

Boman Index

7.87

Hydrophobicity

-1.004

Evidence 1 Activity

Source & Reference

Database Source NA