TPDB

3D PDB MODEL

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TPDB ID TPDB29706

Activity

Toxicity

Activity_category_statistics

Toxicity and safety peptides

Database_Source

Peptipedia

Sequence_Type

standard

Has_Modification No

Description A 39-aa standard natural toxicity peptide sequence curated from Peptipedia, with an available 3D structural model.

Sequence

DCNEIPTEGWAKPSLKVSLTSNNGEASDIRSANALGFMR

FASTA

>TPDB29706|Toxicity|length=39
DCNEIPTEGWAKPSLKVSLTSNNGEASDIRSANALGFMR

Formula C177H284N52O61S2

Absent Amino Acids QHY

Common Amino Acids S

Mass 4180.63

PI 4.72

Basic Residues 4

Acidic Residues 5

Hydrophobic Residues 13

Net Charge -1

Boman Index 9.30

Hydrophobicity -0.513

Aliphatic Index 67.69

Half Life

Mammalian: 1.1 hour Yeast: 3 min E.coli: >10 hour

Extinction Coefficient Cystines 5500

Absorbance 280nm 131.56

Polar Residues 12

number

4

A

2

R

4

N

2

D

1

C

3

E

0

Q

3

G

0

H

2

I

3

L

2

K

1

M

1

F

2

P

5

S

2

T

1

W

0

Y

1

V

Amino Acid Distribution

A: 4 R: 2 N: 4 D: 2 C: 1 E: 3 Q: 0 G: 3 H: 0 I: 2 L: 3 K: 2 M: 1 F: 1 P: 2 S: 5 T: 2 W: 1 Y: 0 V: 1

Length

39

Formula

C177H284N52O61S2

Mass

4180.63

PI

4.72

Net Charge

-1

Boman Index

9.30

Hydrophobicity

-0.513

Evidence 1 Activity

Source & Reference

Database Source NA