TPDB

3D PDB MODEL

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TPDB ID TPDB29294

Activity

Toxicity

Activity_category_statistics

Toxicity and safety peptides

Database_Source

Peptipedia

Sequence_Type

modified_plain

Has_Modification Yes

Description A 32-aa modified toxicity peptide sequence curated from Peptipedia, with an available 3D structural model.

Modification

Modified, details unspecified

Sequence

CRAEGTYCENDSQCCLNECCWGGCGHPCRHPX

FASTA

>TPDB29294|Toxicity|length=32
CRAEGTYCENDSQCCLNECCWGGCGHPCRHPX

Formula C134H199N45O46S8

Absent Amino Acids IKMFV

Common Amino Acids C

Mass 3432.81

PI 5.25

Basic Residues 4

Acidic Residues 4

Hydrophobic Residues 4

Net Charge -2

Boman Index 8.02

Hydrophobicity -0.713

Aliphatic Index 15.31

Half Life

Mammalian: 1.2 hour Yeast: >20 hour E.coli: >10 hour

Extinction Coefficient Cystines 7490

Absorbance 280nm 218.19

Polar Residues 14

number

1

A

2

R

2

N

1

D

8

C

3

E

1

Q

4

G

2

H

0

I

1

L

0

K

0

M

0

F

2

P

1

S

1

T

1

W

1

Y

0

V

Amino Acid Distribution

A: 1 R: 2 N: 2 D: 1 C: 8 E: 3 Q: 1 G: 4 H: 2 I: 0 L: 1 K: 0 M: 0 F: 0 P: 2 S: 1 T: 1 W: 1 Y: 1 V: 0

Length

32

Formula

C134H199N45O46S8

Mass

3432.81

PI

5.25

Net Charge

-2

Boman Index

8.02

Hydrophobicity

-0.713

Evidence 1 Activity

Source & Reference

Database Source NA