TPDB

3D PDB MODEL

Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber.

TPDB ID TPDB29279

Activity

Toxicity

Activity_category_statistics

Toxicity and safety peptides

Database_Source

Peptipedia

Sequence_Type

modified_plain

Has_Modification Yes

Description A 26-aa modified toxicity peptide sequence curated from Peptipedia, with an available 3D structural model.

Modification

Modified, details unspecified

Sequence

CQGRGAPCSKTMYNCCIGSCNRGRCZ

FASTA

>TPDB29279|Toxicity|length=26
CQGRGAPCSKTMYNCCIGSCNRGRCZ

Formula C101H170N38O33S7

Absent Amino Acids DEHLFWV

Common Amino Acids C

Mass 2669.12

PI 8.59

Basic Residues 4

Acidic Residues 0

Hydrophobic Residues 4

Net Charge +4

Boman Index 2.64

Hydrophobicity -0.442

Aliphatic Index 18.85

Half Life

Mammalian: 1.2 hour Yeast: >20 hour E.coli: >10 hour

Extinction Coefficient Cystines 1865

Absorbance 280nm 69.87

Polar Residues 13

number

1

A

3

R

2

N

0

D

6

C

0

E

1

Q

4

G

0

H

1

I

0

L

1

K

1

M

0

F

1

P

2

S

1

T

0

W

1

Y

0

V

Amino Acid Distribution

A: 1 R: 3 N: 2 D: 0 C: 6 E: 0 Q: 1 G: 4 H: 0 I: 1 L: 0 K: 1 M: 1 F: 0 P: 1 S: 2 T: 1 W: 0 Y: 1 V: 0

Length

26

Formula

C101H170N38O33S7

Mass

2669.12

PI

8.59

Net Charge

+4

Boman Index

2.64

Hydrophobicity

-0.442

Evidence 1 Activity

Source & Reference

Database Source NA