TPDB

3D PDB MODEL

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TPDB ID TPDB29239

Activity

Toxicity

Activity_category_statistics

Toxicity and safety peptides

Database_Source

Peptipedia ToxinPred 3.0

Sequence_Type

standard

Has_Modification No

Description A 34-aa standard natural toxicity peptide sequence curated from Peptipedia and ToxinPred 3.0, with an available 3D structural model.

Sequence

CRNRFEECWEDSECCEELCCDGPNYCKDSIGRCH

FASTA

>TPDB29239|Toxicity|length=34
CRNRFEECWEDSECCEELCCDGPNYCKDSIGRCH

Formula C160H239N49O58S8

Absent Amino Acids AQMTV

Common Amino Acids C

Mass 4033.43

PI 4.22

Basic Residues 5

Acidic Residues 9

Hydrophobic Residues 5

Net Charge -5

Boman Index 15.05

Hydrophobicity -1.006

Aliphatic Index 22.94

Half Life

Mammalian: 1.2 hour Yeast: >20 hour E.coli: >10 hour

Extinction Coefficient Cystines 7490

Absorbance 280nm 185.70

Polar Residues 13

number

0

A

3

R

2

N

3

D

8

C

6

E

0

Q

2

G

1

H

1

I

1

L

1

K

0

M

1

F

1

P

2

S

0

T

1

W

1

Y

0

V

Amino Acid Distribution

A: 0 R: 3 N: 2 D: 3 C: 8 E: 6 Q: 0 G: 2 H: 1 I: 1 L: 1 K: 1 M: 0 F: 1 P: 1 S: 2 T: 0 W: 1 Y: 1 V: 0

Length

34

Formula

C160H239N49O58S8

Mass

4033.43

PI

4.22

Net Charge

-5

Boman Index

15.05

Hydrophobicity

-1.006

Evidence 1 Activity

Source & Reference

Database Source NA