TPDB

3D PDB MODEL

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TPDB ID TPDB29071

Activity

Toxicity

Activity_category_statistics

Toxicity and safety peptides

Database_Source

Peptipedia ToxinPred 3.0

Sequence_Type

standard

Has_Modification No

Description A 34-aa standard natural toxicity peptide sequence curated from Peptipedia and ToxinPred 3.0, with an available 3D structural model.

Sequence

CKGYHAECERDSECCSGDCHCLNAADCAGFTHKC

FASTA

>TPDB29071|Toxicity|length=34
CKGYHAECERDSECCSGDCHCLNAADCAGFTHKC

Formula C143H216N46O52S8

Absent Amino Acids QIMPWV

Common Amino Acids C

Mass 3668.05

PI 5.21

Basic Residues 6

Acidic Residues 6

Hydrophobic Residues 7

Net Charge -3

Boman Index 11.04

Hydrophobicity -0.512

Aliphatic Index 23.24

Half Life

Mammalian: 1.2 hour Yeast: >20 hour E.coli: >10 hour

Extinction Coefficient Cystines 1990

Absorbance 280nm 54.25

Polar Residues 13

number

4

A

1

R

1

N

3

D

8

C

3

E

0

Q

3

G

3

H

0

I

1

L

2

K

0

M

1

F

0

P

2

S

1

T

0

W

1

Y

0

V

Amino Acid Distribution

A: 4 R: 1 N: 1 D: 3 C: 8 E: 3 Q: 0 G: 3 H: 3 I: 0 L: 1 K: 2 M: 0 F: 1 P: 0 S: 2 T: 1 W: 0 Y: 1 V: 0

Length

34

Formula

C143H216N46O52S8

Mass

3668.05

PI

5.21

Net Charge

-3

Boman Index

11.04

Hydrophobicity

-0.512

Evidence 1 Activity

Source & Reference

Database Source NA