TPDB

3D PDB MODEL

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TPDB ID TPDB28885

Activity

Toxicity

Activity_category_statistics

Toxicity and safety peptides

Database_Source

Peptipedia

Sequence_Type

modified_plain

Has_Modification Yes

Description A 35-aa modified toxicity peptide sequence curated from Peptipedia, with an available 3D structural model.

Modification

Modified, details unspecified

Sequence

CGPCFTTDHQMEQKCAECCGGIGKCYGPQCLCNRZ

FASTA

>TPDB28885|Toxicity|length=35
CGPCFTTDHQMEQKCAECCGGIGKCYGPQCLCNRZ

Formula C147H231N45O48S9

Absent Amino Acids SWV

Common Amino Acids C

Mass 3685.26

PI 6.69

Basic Residues 4

Acidic Residues 3

Hydrophobic Residues 6

Net Charge -0

Boman Index 7.15

Hydrophobicity -0.374

Aliphatic Index 25.14

Half Life

Mammalian: 1.2 hour Yeast: >20 hour E.coli: >10 hour

Extinction Coefficient Cystines 1990

Absorbance 280nm 54.00

Polar Residues 15

number

1

A

1

R

1

N

1

D

8

C

2

E

3

Q

5

G

1

H

1

I

1

L

2

K

1

M

1

F

2

P

0

S

2

T

0

W

1

Y

0

V

Amino Acid Distribution

A: 1 R: 1 N: 1 D: 1 C: 8 E: 2 Q: 3 G: 5 H: 1 I: 1 L: 1 K: 2 M: 1 F: 1 P: 2 S: 0 T: 2 W: 0 Y: 1 V: 0

Length

35

Formula

C147H231N45O48S9

Mass

3685.26

PI

6.69

Net Charge

-0

Boman Index

7.15

Hydrophobicity

-0.374

Evidence 1 Activity

Source & Reference

Database Source NA